5T7Q Signaling Protein date Sep 05, 2016
title Tirap Phosphoinositide-Binding Motif
authors D.G.S.Capelluto, J.F.Ellena, G.Armstrong, X.Zhao, S.Xiao
compound source
Molecule: Tollinterleukin-1 Receptor Domain-Containing Ada Protein;
Chain: A
Fragment: Unp Residues 15-35
Synonym: Tir Domain-Containing Adapter Protein,Adaptor Prot Myd88 Adapter-Like Protein,Myd88-2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tirap, Mal
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
methodSolution NMR
Primary referenceMembrane targeting of TIRAP is negatively regulated by phosphorylation in its phosphoinositide-binding motif., Zhao X, Xiong W, Xiao S, Tang TX, Ellena JF, Armstrong GS, Finkielstein CV, Capelluto DG, Sci Rep. 2017 Feb 22;7:43043. doi: 10.1038/srep43043. PMID:28225045
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (5t7q.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 5T7Q
  • Original NMR restraints for 5T7Q from PDB
  • Retrieve 5T7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T7Q from S2C, [Save to disk]
  • View 5T7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5T7Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t7q_A] [5t7q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5T7Q
  • Community annotation for 5T7Q at PDBWiki (http://pdbwiki.org)

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