5TAB Transcription date Sep 09, 2016
title Crystal Structure Of The Phd Finger Of Phf20
authors B.J.Klein, T.G.Kutateladze
compound source
Molecule: Phd Finger Protein 20
Chain: A
Fragment: Residues 651-698
Synonym: Glioma-Expressed Antigen 2,Hepatocellular Carcinom Associated Antigen 58,Novel Zinc Finger Protein,Transcripti Tzp;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Phf20, C20orf104, Glea2, Hca58, Nzf, Tzp
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Rossetta2
Expression_system_variant: Ripl
symmetry Space Group: P 61
R_factor 0.118 R_Free 0.144
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.739 46.739 50.928 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.25 Å
ligand GOL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePHF20 Readers Link Methylation of Histone H3K4 and p53 with H4K16 Acetylation., Klein BJ, Wang X, Cui G, Yuan C, Botuyan MV, Lin K, Lu Y, Wang X, Zhao Y, Bruns CJ, Mer G, Shi X, Kutateladze TG, Cell Rep. 2016 Oct 18;17(4):1158-1170. doi: 10.1016/j.celrep.2016.09.056. PMID:27760318
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (5tab.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 5TAB
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  • Retrieve 5TAB in mmCIF format [Save to disk]
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tab_A] [5tab]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5TAB: [PHD ] by SMART
  • Other resources with information on 5TAB
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