5TDA	Ligase	date	Sep 19, 2016
title	Crystal Structure Of The Ubr-Box Domain From Ubr2 In Complex N-Degron
authors	J.Munoz-Escobar, G.Kozlov, K.Gehring
compound		source
Molecule: E3 Ubiquitin-Protein Ligase Ubr2 Chain: A Synonym: N-Recognin-2,Ubiquitin-Protein Ligase E3-Alpha-2,U Protein Ligase E3-Alpha-II; Ec: 6.3.2.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ubr2, C6orf133, Kiaa0349 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21
Molecule: Arg-Leu-Trp-Ser Peptide Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21
symmetry	Space Group: P 21 21 21	R_factor 0.120 R_Free 0.128
crystal cell	length a length b length c angle alpha angle beta angle gamma 28.702 37.158 57.474 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	0.79 Å
ligand	ZN	enzyme	Ligase E.C.6.3.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Bound Waters Mediate Binding of Diverse Substrates to a Ubiquitin Ligase., Munoz-Escobar J, Matta-Camacho E, Cho C, Kozlov G, Gehring K, Structure. 2017 Mar 27. pii: S0969-2126(17)30064-3. doi:, 10.1016/j.str.2017.03.004. PMID:28392261

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (5tda.pdb1.gz) 43 Kb LPC: Ligand-Protein Contacts for 5TDA CSU: Contacts of Structural Units for 5TDA Structure Factors (1044 Kb) Retrieve 5TDA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TDA from S2C, [Save to disk] Re-refined 5tda structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tda] [5tda_B] [5tda_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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