5TE0 Transferase Transferase Inhibitor date Sep 20, 2016
title Crystal Structure Of Adaptor Protein 2 Associated Kinase (Aa Complex With Bibf 1120
authors R.M.Counago, J.M.Elkins, C.Bountra, P.Arruda, A.M.Edwards, O.Gile Structural Genomics Consortium (Sgc)
compound source
Molecule: Ap2-Associated Protein Kinase 1
Chain: A
Fragment: Unp Residues 27-365
Synonym: Adaptor-Associated Kinase 1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aak1, Kiaa1048
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: De3
Expression_system_plasmid: Pnic-Cth0
symmetry Space Group: I 2 2 2
R_factor 0.181 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.465 119.474 125.035 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, PEG, XIN enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]
  • Biological Unit Coordinates (5te0.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 5TE0
  • CSU: Contacts of Structural Units for 5TE0
  • Structure Factors (1138 Kb)
  • Retrieve 5TE0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TE0 from S2C, [Save to disk]
  • Re-refined 5te0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TE0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TE0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5te0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5te0_A] [5te0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5TE0: [STYKc ] by SMART
  • Other resources with information on 5TE0
  • Community annotation for 5TE0 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science