5TF1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FME enzyme
Primary referenceDifferences in Allelic Frequency and CDRH3 Region Limit the Engagement of HIV Env Immunogens by Putative VRC01 Neutralizing Antibody Precursors., Yacoob C, Pancera M, Vigdorovich V, Oliver BG, Glenn JA, Feng J, Sather DN, McGuire AT, Stamatatos L, Cell Rep. 2016 Nov 1;17(6):1560-1570. doi: 10.1016/j.celrep.2016.10.017. PMID:27806295
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (5tf1.pdb1.gz) 199 Kb
  • LPC: Ligand-Protein Contacts for 5TF1
  • CSU: Contacts of Structural Units for 5TF1
  • Structure Factors (401 Kb)
  • Retrieve 5TF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TF1 from S2C, [Save to disk]
  • Re-refined 5tf1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tf1] [5tf1_H] [5tf1_L]
  • SWISS-PROT database:
  • Domains found in 5TF1: [IG_like] [IGv ] by SMART

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