5TF5 Transferase Transferase Inhibitor date Sep 24, 2016
title Crystal Structure Of Human Kat-2 In Complex With A Reversibl Inhibitor
authors A.Nematollahi, G.Sun, W.B.Church
compound source
Molecule: Kynureninealpha-Aminoadipate Aminotransferase, Mitochondrial;
Chain: A, B
Synonym: Kataadat,2-Aminoadipate Aminotransferase,2-Aminoa Transaminase,Alpha-Aminoadipate Aminotransferase,Aadat,Kynu Aminotransferase II,Kynurenine--Oxoglutarate Aminotransfera Kynurenine--Oxoglutarate Transaminase 2,Kynurenine--Oxoglut Transaminase II;
Ec: 2.6.1.39,2.6.1.7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aadat, Kat2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.219 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.883 99.275 107.923 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.81 Å
ligand 7AR, LLP enzyme Transferase E.C.2.6.1.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • kynurenine-oxoglutarate tran...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (275 Kb) [Save to disk]
  • Biological Unit Coordinates (5tf5.pdb1.gz) 269 Kb
  • LPC: Ligand-Protein Contacts for 5TF5
  • CSU: Contacts of Structural Units for 5TF5
  • Structure Factors (1803 Kb)
  • Retrieve 5TF5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TF5 from S2C, [Save to disk]
  • Re-refined 5tf5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TF5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TF5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tf5_A] [5tf5] [5tf5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TF5
  • Community annotation for 5TF5 at PDBWiki (http://pdbwiki.org)

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