5TGT Ligase date Sep 28, 2016
title Crystal Structure Of Glytamyl-Trna Synthetase Glurs From Pse Aeruginosa
authors Seattle Structural Genomics Center For Infectious Disease (S
compound source
Molecule: Glutamate--Trna Ligase
Chain: A, B
Fragment: Psaea.01348.A.B1
Synonym: Glutamyl-Trna Synthetase,Glurs
Ec: 6.1.1.17
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Atcc 15692 Dsm 22644 Cip 104116 Jcm 14847 L 1c Prs 101 Pao1;
Gene: Gltx, Pa3134
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psaea.01348.A.B1
symmetry Space Group: P 21 21 21
R_factor 0.184 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.840 138.660 202.450 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand 2PE, GOL, SO4 enzyme Ligase E.C.6.1.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (5tgt.pdb1.gz) 286 Kb
  • LPC: Ligand-Protein Contacts for 5TGT
  • CSU: Contacts of Structural Units for 5TGT
  • Structure Factors (1026 Kb)
  • Retrieve 5TGT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TGT from S2C, [Save to disk]
  • Re-refined 5tgt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TGT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TGT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tgt_A] [5tgt] [5tgt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TGT
  • Community annotation for 5TGT at PDBWiki (http://pdbwiki.org)

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