5TJ8 Transferase date Oct 03, 2016
title Structure Of Wwp2 Ww2-2,3-Linker-Hect (No Ww2 Observed)
authors Z.Chen, S.B.Gabelli
compound source
Molecule: Nedd4-Like E3 Ubiquitin-Protein Ligase Wwp2,Nedd4 Ubiquitin-Protein Ligase Wwp2;
Chain: A
Synonym: Atrophin-1-Interacting Protein 2,Aip2,Hect-Type E3 Transferase Wwp2,Ww Domain-Containing Protein 2,Atrophin-1- Interacting Protein 2,Aip2,Hect-Type E3 Ubiquitin Transfera Domain-Containing Protein 2;
Ec: 2.3.2.26,2.3.2.26
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Wwp2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon Plus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-2
symmetry Space Group: P 21 21 21
R_factor 0.215 R_Free 0.316
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.229 89.269 111.474 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand NA enzyme Transferase E.C.2.3.2.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (5tj8.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 5TJ8
  • CSU: Contacts of Structural Units for 5TJ8
  • Structure Factors (443 Kb)
  • Retrieve 5TJ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TJ8 from S2C, [Save to disk]
  • Re-refined 5tj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TJ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5TJ8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tj8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5TJ8
  • Community annotation for 5TJ8 at PDBWiki (http://pdbwiki.org)

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