OCA Atlas for 5TRS

5TRS

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

7HZ

enzyme

Gene

MRA ; MRA

Gene
Ontology

Chain	Function	Process	Component
O, U, A, S, F, P, T, Q, E, C, D, B, G, R
Y, L, K, a, V, I, J, H, W, b, Z, M, N, X

Primary reference

Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome., Hsu HC, Singh PK, Fan H, Wang R, Sukenick G, Nathan C, Lin G, Li H, Biochemistry. 2017 Jan 10;56(1):324-333. doi: 10.1021/acs.biochem.6b01107. Epub, 2016 Dec 27. PMID:27976853

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (939 Kb) [Save to disk]

Biological Unit Coordinates (5trs.pdb1.gz) 924 Kb

LPC: Ligand-Protein Contacts for 5TRS

CSU: Contacts of Structural Units for 5TRS

Structure Factors (2094 Kb)

Retrieve 5TRS in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5TRS from S2C, [Save to disk]

Re-refined 5trs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TRS in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5trs] [5trs_A] [5trs_B] [5trs_C] [5trs_D] [5trs_E] [5trs_F] [5trs_G] [5trs_H] [5trs_I] [5trs_J] [5trs_K] [5trs_L] [5trs_M] [5trs_N] [5trs_O] [5trs_P] [5trs_Q] [5trs_R] [5trs_S] [5trs_T] [5trs_U] [5trs_V] [5trs_W] [5trs_X] [5trs_Y] [5trs_Z] [5trs_a] [5trs_b]

SWISS-PROT database:

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