5TSQ Hydrolase date Oct 31, 2016
title Crystal Structure Of Iunh From Leishmania Braziliensis In Co D-Ribose
authors J.F.R.Bachega, L.F.S.M.Timmers, P.F.Dalberto, L.Martinelli, A.F. L.A.Basso, O.Norberto De Souza, D.S.Santos
compound source
Molecule: Iunh
Chain: A
Ec: 3.2.2.1
Engineered: Yes
Organism_scientific: Leishmania Braziliensis Braziliensis
Organism_taxid: 1448350
Gene: Lbrm_18_1610
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.153 R_Free 0.169
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.660 94.080 123.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.53 Å
ligand BDR, CA enzyme Hydrolase E.C.3.2.2.1 BRENDA
Gene LBRM
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (5tsq.pdb1.gz) 410 Kb
  • LPC: Ligand-Protein Contacts for 5TSQ
  • CSU: Contacts of Structural Units for 5TSQ
  • Structure Factors (4248 Kb)
  • Retrieve 5TSQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TSQ from S2C, [Save to disk]
  • Re-refined 5tsq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TSQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TSQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tsq] [5tsq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TSQ
  • Community annotation for 5TSQ at PDBWiki (http://pdbwiki.org)

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