5TX4	Transferase Cytokine	date	Nov 15, 2016
title	Derivative Of Mouse Tgf-Beta2, With A Deletion Of Residues 5 K25r, R26k, L51r, A74k, C77s, L89v, I92v, K94r T95k, I98v S Amino Acid Substitutions, Bound To Human Tgf-Beta Type II R Ectodomain Residues 15-130
authors	A.P.Hinck, S.Kim
compound		source
Molecule: Tgf-Beta Receptor Type-2 Chain: A Fragment: Unp Residues 38-153 Synonym: Tgfr-2,Tgf-Beta Type II Receptor,Transforming Grow Beta Receptor Type II,Tbetar-II; Ec: 2.7.11.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tgfbr2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Transforming Growth Factor Beta-2 Chain: B Fragment: Unp Residues 303-414 Synonym: Tgf-Beta-2,Bsc-1 Cell Growth Inhibitor,Cetermin, Glioblastoma-Derived T-Cell Suppressor Factor,G-Tsf,Polyerg Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tgfb2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.194 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.019 70.772 77.116 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.88 Å
ligand		enzyme	Transferase E.C.2.7.11.30 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	An Engineered TGF-beta Monomer that Functions as a Dominant Negative to Block TGF-beta Signaling., Kim SK, Barron L, Hinck CS, Petrunak EM, Cano KE, Thangirala A, Iskra B, Brothers M, Vonberg M, Leal B, Richter B, Kodali R, Taylor AB, Du S, Barnes CO, Sulea T, Calero G, Hart PJ, Hart MJ, Demeler B, Hinck AP, J Biol Chem. 2017 Feb 22. pii: jbc.M116.768754. doi: 10.1074/jbc.M116.768754. PMID:28228478

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (5tx4.pdb1.gz) 34 Kb Biological Unit Coordinates (5tx4.pdb2.gz) 31 Kb CSU: Contacts of Structural Units for 5TX4 Structure Factors (168 Kb) Retrieve 5TX4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TX4 from S2C, [Save to disk] Re-refined 5tx4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TX4 in 3D

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Visual 3D analysis of 5TX4

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5tx4 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tx4_A] [5tx4] [5tx4_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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