5U1M Protein Binding date Nov 28, 2016
title Structure Of The Irs-1 Ptb Domain Bound To The Juxtamembrane The Insulin Receptor
authors M.J.Eck, S.Dhe-Paganon
compound source
Molecule: Insulin Receptor Substrate 1
Chain: A
Fragment: Ptb Domain (Unp Residues 161-265)
Synonym: Irs-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Irs1
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333

Molecule: Insulin Receptor
Chain: B
Fragment: Juxtamembrane Region (Unp Residues 991-999)
Synonym: Ir
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Insr
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333
symmetry Space Group: P 4 2 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.370 68.370 57.520 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
Primary referenceDomain-dependent effects of insulin and IGF-1 receptors on signalling and gene expression., Cai W, Sakaguchi M, Kleinridders A, Gonzalez-Del Pino G, Dreyfuss JM, O'Neill BT, Ramirez AK, Pan H, Winnay JN, Boucher J, Eck MJ, Kahn CR, Nat Commun. 2017 Mar 27;8:14892. doi: 10.1038/ncomms14892. PMID:28345670
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (5u1m.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 5U1M
  • Retrieve 5U1M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U1M from S2C, [Save to disk]
  • View 5U1M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5U1M
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5u1m from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u1m_A] [5u1m_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5U1M
  • Community annotation for 5U1M at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science