5U5R Transport Protein date Dec 07, 2016
title Crystal Structure And X-Ray Diffraction Data Collection Of I Alpha From Mus Musculus Complexed With A Pms2 Nls Peptide
authors A.C.Barros, A.A.Takeda, T.R.Dreyer, A.Velazquez-Campoy, B.Kobe, M
compound source
Molecule: Importin Subunit Alpha-1
Chain: A
Synonym: Importin Alpha P1,Karyopherin Subunit Alpha-2,Pend Targeting Complex 58 Kda Subunit,Ptac58,Rag Cohort Protein Alpha;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Kpna2, Rch1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Mismatch Repair Endonuclease Pms2
Chain: B
Synonym: Dna Mismatch Repair Protein Pms2,Pms1 Protein Homo
Ec: 3.1.-.-
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.174 R_Free 0.207
length a length b length c angle alpha angle beta angle gamma
77.124 89.544 97.038 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand DTT enzyme Hydrolase E.C.3.1 BRENDA

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (5u5r.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 5U5R
  • CSU: Contacts of Structural Units for 5U5R
  • Structure Factors (1041 Kb)
  • Retrieve 5U5R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U5R from S2C, [Save to disk]
  • View 5U5R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5U5R
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5u5r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u5r_A] [5u5r_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5U5R
  • Community annotation for 5U5R at PDBWiki (http://pdbwiki.org)

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