5U6H Rna Binding Protein date Dec 08, 2016
title Solution Structure Of The Zinc Fingers 1 And 2 Of Mbnl1
authors P.D.Phukan, S.Park, M.M.Martinez-Yamout, M.Zeeb, H.J.Dyson, P.E.W
compound source
Molecule: Muscleblind-Like Protein 1
Chain: A
Fragment: Zinc Fingers 1 And 2 (Unp Residues 1-92)
Synonym: Triplet-Expansion Rna-Binding Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mbnl1, Exp, Kiaa0428, Mbnl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for interaction of the tandem zinc finger domains of human muscleblind with cognate RNA from human cardiac troponin T., Park S, Phukan PD, Zeeb M, Martinez-Yamout MA, Dyson HJ, Wright PE, Biochemistry. 2017 Jul 18. doi: 10.1021/acs.biochem.7b00484. PMID:28718627
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (480 Kb) [Save to disk]
  • Biological Unit Coordinates (5u6h.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 5U6H
  • CSU: Contacts of Structural Units for 5U6H
  • Original NMR restraints for 5U6H from PDB
  • Retrieve 5U6H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U6H from S2C, [Save to disk]
    • View 5U6H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5U6H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u6h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5U6H
  • Community annotation for 5U6H at PDBWiki (http://pdbwiki.org)

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