5U9B Rna Binding Protein Rna date Dec 15, 2016
title Solution Structure Of The Zinc Fingers 1 And 2 Of Mbnl1 In C With Human Cardiac Troponin T Pre-Mrna
authors P.D.Phukan, S.Park, M.M.Martinez-Yamout, M.Zeeb, H.J.Dyson, P.E.W
compound source
Molecule: Muscleblind-Like Protein 1
Chain: A
Fragment: Zinc Fingers 1 And 2 (Unp Residues 1-92)
Synonym: Triplet-Expansion Rna-Binding Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mbnl1, Exp, Kiaa0428, Mbnl
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rna (5'-R(Pgpupcpupcpgpcpupupupupcpc 3');
Chain: B
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for interaction of the tandem zinc finger domains of human muscleblind with cognate RNA from human cardiac troponin T., Park S, Phukan PD, Zeeb M, Martinez-Yamout MA, Dyson HJ, Wright PE, Biochemistry. 2017 Jul 18. doi: 10.1021/acs.biochem.7b00484. PMID:28718627
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (636 Kb) [Save to disk]
  • Biological Unit Coordinates (5u9b.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 5U9B
  • CSU: Contacts of Structural Units for 5U9B
  • Original NMR restraints for 5U9B from PDB
  • Retrieve 5U9B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U9B from S2C, [Save to disk]
    • View 5U9B in 3D
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    • Visual 3D analysis of 5U9B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u9b_A] [5u9b_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5U9B
  • Community annotation for 5U9B at PDBWiki (http://pdbwiki.org)

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