5UDG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, PGE enzyme
Gene A9D36 ; AX282 ; B4122 ; B4417 ; BN2127 ; BN2127 ; BN2127 ; BN2127 ; SC09
Gene
Ontology
ChainFunctionProcessComponent
E, B, D, A, C


Primary referenceProtection of the Queuosine Biosynthesis Enzyme QueF from Irreversible Oxidation by a Conserved Intramolecular Disulfide., Mohammad A, Bon Ramos A, Lee BW, Cohen SW, Kiani MK, Iwata-Reuyl D, Stec B, Swairjo MA, Biomolecules. 2017 Mar 16;7(1). pii: E30. doi: 10.3390/biom7010030. PMID:28300774
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (5udg.pdb1.gz) 254 Kb
  • LPC: Ligand-Protein Contacts for 5UDG
  • CSU: Contacts of Structural Units for 5UDG
  • Structure Factors (888 Kb)
  • Retrieve 5UDG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UDG from S2C, [Save to disk]
  • Re-refined 5udg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5UDG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5udg] [5udg_A] [5udg_B] [5udg_C] [5udg_D] [5udg_E]
  • SWISS-PROT database:

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