5UFI	Ligase Inhibitor	date	Jan 04, 2017
title	Dcn1 Bound To Di-591
authors	J.Stuckey
compound		source
Molecule: Dcn1-Like Protein 1 Chain: A, B, C, D Fragment: Unp Residues 58-259 Synonym: Dcun1 Domain-Containing Protein 1,Defective In Cul Neddylation Protein 1-Like Protein 1,Squamous Cell Carcinom Oncogene; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dcun1d1, Dcun1l1, Rp42, Sccro Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.210 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.142 101.647 173.521 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.58 Å
ligand	8B1	enzyme
Primary reference	A potent small-molecule inhibitor of the DCN1-UBC12 interaction that selectively blocks cullin 3 neddylation., Zhou H, Lu J, Liu L, Bernard D, Yang CY, Fernandez-Salas E, Chinnaswamy K, Layton S, Stuckey J, Yu Q, Zhou W, Pan Z, Sun Y, Wang S, Nat Commun. 2017 Oct 27;8(1):1150. doi: 10.1038/s41467-017-01243-7. PMID:29074978

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (264 Kb) [Save to disk] Biological Unit Coordinates (5ufi.pdb1.gz) 67 Kb Biological Unit Coordinates (5ufi.pdb2.gz) 66 Kb Biological Unit Coordinates (5ufi.pdb3.gz) 66 Kb Biological Unit Coordinates (5ufi.pdb4.gz) 65 Kb LPC: Ligand-Protein Contacts for 5UFI CSU: Contacts of Structural Units for 5UFI Structure Factors (1208 Kb) Retrieve 5UFI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UFI from S2C, [Save to disk]

View 5UFI in 3D

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Visual 3D analysis of 5UFI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ufi_C] [5ufi_A] [5ufi_D] [5ufi_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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