5UGD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	89S	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	X-ray crystal structure of plasmin with tranexamic acid-derived active site inhibitors., Law RHP, Wu G, Leung EWW, Hidaka K, Quek AJ, Caradoc-Davies TT, Jeevarajah D, Conroy PJ, Kirby NM, Norton RS, Tsuda Y, Whisstock JC, Blood Adv. 2017 May 9;1(12):766-771. doi: 10.1182/bloodadvances.2016004150., eCollection 2017 May 9. PMID:29296720

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (5ugd.pdb1.gz) 81 Kb LPC: Ligand-Protein Contacts for 5UGD CSU: Contacts of Structural Units for 5UGD Structure Factors (1530 Kb) Retrieve 5UGD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UGD from S2C, [Save to disk] Re-refined 5ugd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UGD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ugd_A] SWISS-PROT database:

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