5UJM Replication date Jan 18, 2017
title Structure Of The Active Form Of Human Origin Recognition Com Its Atpase Motor Module
authors A.Tocilj, K.On, Z.Yuan, J.Sun, E.Elkayam, H.Li, B.Stillman, L.Joshu
compound source
Molecule: Origin Recognition Complex Subunit 1
Chain: A
Fragment: Unp Residues 471-861
Synonym: Replication Control Protein 1
Engineered: Yes
Other_details: Strep-Strep-Sumo-Tagged
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Orc1, Orc1l, Parc1
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_common: Fall Armyworm
Expression_system_taxid: 1491790

Molecule: Origin Recognition Complex Subunit 2
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Orc2, Orc2l
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_common: Fall Armyworm
Expression_system_taxid: 1491790

Molecule: Origin Recognition Complex Subunit 3
Chain: C
Synonym: Origin Recognition Complex Subunit Latheo
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Orc3, Latheo, Orc3l
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_common: Fall Armyworm
Expression_system_taxid: 1491790

Molecule: Origin Recognition Complex Subunit 4
Chain: D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Orc4, Orc4l
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_common: Fall Armyworm
Expression_system_taxid: 1491790

Molecule: Origin Recognition Complex Subunit 5
Chain: E
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Orc5, Orc5l
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_common: Fall Armyworm
Expression_system_taxid: 1491790
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 18.00 Å
ligand ATP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


Primary referenceStructure of the active form of human origin recognition complex and its ATPase motor module., Tocilj A, On KF, Yuan Z, Sun J, Elkayam E, Li H, Stillman B, Joshua-Tor L, Elife. 2017 Jan 23;6. pii: e20818. doi: 10.7554/eLife.20818. PMID:28112645
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (5ujm.pdb1.gz) 271 Kb
  • LPC: Ligand-Protein Contacts for 5UJM
  • CSU: Contacts of Structural Units for 5UJM
  • Retrieve 5UJM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UJM from S2C, [Save to disk]
  • View 5UJM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UJM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ujm from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ujm_E] [5ujm_A] [5ujm_B] [5ujm] [5ujm_D] [5ujm_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UJM
  • Community annotation for 5UJM at PDBWiki (http://pdbwiki.org)

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