5UKW Oxidoreductase date Jan 23, 2017
title Crystal Structure Of Human Glucose 6-Phosphate Dehydrogenase (A277c) Complexed With G6p
authors A.T.Ranzani, A.T.Cordeiro
compound source
Molecule: Glucose-6-Phosphate 1-Dehydrogenase
Chain: A
Fragment: Unp Residues 59-541
Synonym: G6pd
Ec: 1.1.1.49
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: G6pd
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet-Sumo
symmetry Space Group: F 2 2 2
R_factor 0.189 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.099 177.817 216.470 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand BG6, GOL enzyme Oxidoreductase E.C.1.1.1.49 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMutations in the tetramer interface of human glucose-6-phosphate dehydrogenase reveals kinetic differences between oligomeric states., Ranzani AT, Cordeiro AT, FEBS Lett. 2017 Mar 30. doi: 10.1002/1873-3468.12638. PMID:28370139
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (5ukw.pdb1.gz) 314 Kb
  • LPC: Ligand-Protein Contacts for 5UKW
  • CSU: Contacts of Structural Units for 5UKW
  • Structure Factors (733 Kb)
  • Retrieve 5UKW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UKW from S2C, [Save to disk]
  • Re-refined 5ukw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5UKW in 3D
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  • Visual 3D analysis of 5UKW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ukw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ukw_A] [5ukw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UKW
  • Community annotation for 5UKW at PDBWiki (http://pdbwiki.org)

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