5UNA Transferase date Jan 30, 2017
title Fragment Of 7sk Snrna Methylphosphate Capping Enzyme
authors H.Wu, W.Tempel, L.Dombrovski, A.A.Mccarthy, P.Loppnau, C.Bountra, C.H.Arrowsmith, A.M.Edwards, H.Park, Structural Genomics Conso (Sgc)
compound source
Molecule: 7sk Snrna Methylphosphate Capping Enzyme
Chain: A, B, C, D, E, F
Synonym: Mepce,Bicoid-Interacting Protein 3 Homolog,Bin3 Ho
Ec: 2.1.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mepce, Bcdin3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Codon Plus Ril
Expression_system_plasmid: Pet28a-Lic

Molecule: Unidentified Peptide Sectionfragment
Chain: M, N, O, Q, R
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: H 3
R_factor 0.204 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
183.240 183.240 151.390 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.55 Å
ligand MSE, SAH enzyme Transferase E.C.2.1.1 BRENDA
note 5UNA supersedes 3G07
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (427 Kb) [Save to disk]
  • Biological Unit Coordinates (5una.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (5una.pdb2.gz) 73 Kb
  • Biological Unit Coordinates (5una.pdb3.gz) 71 Kb
  • Biological Unit Coordinates (5una.pdb4.gz) 72 Kb
  • Biological Unit Coordinates (5una.pdb5.gz) 73 Kb
  • Biological Unit Coordinates (5una.pdb6.gz) 70 Kb
  • Biological Unit Coordinates (5una.pdb7.gz) 4 Kb
  • Biological Unit Coordinates (5una.pdb8.gz) 4 Kb
  • Biological Unit Coordinates (5una.pdb9.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 5UNA
  • CSU: Contacts of Structural Units for 5UNA
  • Structure Factors (10868 Kb)
  • Retrieve 5UNA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UNA from S2C, [Save to disk]
  • Re-refined 5una structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5UNA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UNA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5una_M] [5una] [5una_C] [5una_N] [5una_O] [5una_E] [5una_D] [5una_B] [5una_A] [5una_R] [5una_Q] [5una_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UNA
  • Community annotation for 5UNA at PDBWiki (http://pdbwiki.org)

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