5UPB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component D, A, C, B
Primary reference	Swit_4259, an acetoacetate decarboxylase-like enzyme from Sphingomonas wittichii RW1., Mydy LS, Mashhadi Z, Knight TW, Fenske T, Hagemann T, Hoppe RW, Han L, Miller TR, Schwabacher AW, Silvaggi NR, Acta Crystallogr F Struct Biol Commun. 2017 Dec 1;73(Pt 12):672-681. doi:, 10.1107/S2053230X17015862. Epub 2017 Nov 14. PMID:29199988

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (475 Kb) [Save to disk] Biological Unit Coordinates (5upb.pdb1.gz) 465 Kb CSU: Contacts of Structural Units for 5UPB Structure Factors (1222 Kb) Retrieve 5UPB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UPB from S2C, [Save to disk] Re-refined 5upb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UPB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5upb_A] [5upb_B] [5upb_C] [5upb_D] SWISS-PROT database:

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