5URV Immune System date Feb 13, 2017
title Crystal Structure Of Frizzled 7 Crd In Complex With C24 Fatt
authors S.Mukund, A.H.Nile, K.Stanger, R.N.Hannoush, W.Wang
compound source
Molecule: Frizzled-7
Chain: A, B
Synonym: Hfz7,Fze3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fzd7
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 21 21 2
R_factor 0.163 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.560 104.902 41.351 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 1PG, NAG, NER, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceUnsaturated fatty acyl recognition by Frizzled receptors mediates dimerization upon Wnt ligand binding., Nile AH, Mukund S, Stanger K, Wang W, Hannoush RN, Proc Natl Acad Sci U S A. 2017 Apr 4. pii: 201618293. doi:, 10.1073/pnas.1618293114. PMID:28377511
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (5urv.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 5URV
  • CSU: Contacts of Structural Units for 5URV
  • Structure Factors (551 Kb)
  • Retrieve 5URV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5URV from S2C, [Save to disk]
  • Re-refined 5urv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5URV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5URV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5urv_B] [5urv_A] [5urv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5URV
  • Community annotation for 5URV at PDBWiki (http://pdbwiki.org)

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