5UT5 Transferase Transferase Inhibitor date Feb 14, 2017
title Jak2 Jh2 In Complex With Glpg0634
authors D.E.Puleo, J.Schlessinger
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A
Synonym: Janus Kinase 2,Jak-2
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.160 R_Free 0.201
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.440 57.381 60.556 90.00 110.03 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 2HB, ACT, DMS, GOL enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceJAK2 JH2 Fluorescence Polarization Assay and Crystal Structures for Complexes with Three Small Molecules., Newton AS, Deiana L, Puleo DE, Cisneros JA, Cutrona KJ, Schlessinger J, Jorgensen WL, ACS Med Chem Lett. 2017 May 17;8(6):614-617. doi: 10.1021/acsmedchemlett.7b00154., eCollection 2017 Jun 8. PMID:28626520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (5ut5.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 5UT5
  • CSU: Contacts of Structural Units for 5UT5
  • Structure Factors (323 Kb)
  • Retrieve 5UT5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UT5 from S2C, [Save to disk]
  • Re-refined 5ut5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5UT5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UT5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ut5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UT5
  • Community annotation for 5UT5 at PDBWiki (http://pdbwiki.org)

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