5V58		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8X1, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid., Song Y, Zhou H, Vo MN, Shi Y, Nawaz MH, Vargas-Rodriguez O, Diedrich JK, Yates JR, Kishi S, Musier-Forsyth K, Schimmel P, Nat Commun. 2017 Dec 22;8(1):2281. doi: 10.1038/s41467-017-02201-z. PMID:29273753

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (5v58.pdb1.gz) 150 Kb LPC: Ligand-Protein Contacts for 5V58 CSU: Contacts of Structural Units for 5V58 Structure Factors (141 Kb) Retrieve 5V58 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V58 from S2C, [Save to disk]

View 5V58 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v58_A] SWISS-PROT database:

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