5V8V Hydrolase Hydrolase Inhibitor date Mar 22, 2017
title Crystal Structure Of Human Renin In Complex With A Biphenylpipderidinylcarbinol
authors N.Concha, B.Zhao
compound source
Molecule: Renin
Chain: A, B
Fragment: Unp Residues 70-406
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ren
Expression_system: Baculoviridae
Expression_system_taxid: 10442
Expression_system_cell: Hek-F
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.367 99.014 147.031 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand
enzyme Hydrolase E.C.3.4.23.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDiscovery of renin inhibitors containing a simple aspartate binding moiety that imparts reduced P450 inhibition., Lawhorn BG, Tran T, Hong VS, Morgan LA, Le BT, Harpel MR, Jolivette L, Diaz E, Schwartz B, Gross JW, Tomaszek T, Semus S, Concha N, Smallwood A, Holt DA, Kallander LS, Bioorg Med Chem Lett. 2017 Sep 23. pii: S0960-894X(17)30954-X. doi:, 10.1016/j.bmcl.2017.09.046. PMID:28985999
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (218 Kb) [Save to disk]
  • Biological Unit Coordinates (5v8v.pdb1.gz) 108 Kb
  • Biological Unit Coordinates (5v8v.pdb2.gz) 108 Kb
  • CSU: Contacts of Structural Units for 5V8V
  • Structure Factors (199 Kb)
  • Retrieve 5V8V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V8V from S2C, [Save to disk]
  • View 5V8V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5V8V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5v8v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v8v_B] [5v8v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5V8V
  • Community annotation for 5V8V at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science