5VAJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACT, GOL, MG, URU	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Amide linkages mimic phosphates in RNA interactions with proteins and are well tolerated in the guide strand of short interfering RNAs., Mutisya D, Hardcastle T, Cheruiyot SK, Pallan PS, Kennedy SD, Egli M, Kelley ML, Smith AVB, Rozners E, Nucleic Acids Res. 2017 Aug 21;45(14):8142-8155. doi: 10.1093/nar/gkx558. PMID:28854734

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (5vaj.pdb1.gz) 60 Kb LPC: Ligand-Protein Contacts for 5VAJ CSU: Contacts of Structural Units for 5VAJ Structure Factors (628 Kb) Retrieve 5VAJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VAJ from S2C, [Save to disk]

View 5VAJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vaj_A] [5vaj_B] [5vaj_C] [5vaj_D] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---