5VEB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand A2G, SIN, SLL enzyme
Gene
Ontology
ChainFunctionProcessComponent
X, Y


Primary referenceDiscovery and Optimization of HKT288, a Cadherin-6-Targeting ADC for the Treatment of Ovarian and Renal Cancers., Bialucha CU, Collins SD, Li X, Saxena P, Zhang X, Durr C, Lafont B, Prieur P, Shim Y, Mosher R, Lee D, Ostrom L, Hu T, Bilic S, Rajlic IL, Capka V, Jiang W, Wagner JP, Elliott G, Veloso A, Piel JC, Flaherty MM, Mansfield KG, Meseck EK, Rubic-Schneider T, London AS, Tschantz WR, Kurz M, Nguyen D, Bourret A, Meyer MJ, Faris JE, Janatpour MJ, Chan VW, Yoder NC, Catcott KC, McShea MA, Sun X, Gao H, Williams J, Hofmann F, Engelman JA, Ettenberg SA, Sellers WR, Lees E, Cancer Discov. 2017 Sep;7(9):1030-1045. doi: 10.1158/2159-8290.CD-16-1414. Epub, 2017 May 19. PMID:28526733
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (5veb.pdb1.gz) 88 Kb
  • Biological Unit Coordinates (5veb.pdb2.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 5VEB
  • CSU: Contacts of Structural Units for 5VEB
  • Structure Factors (2382 Kb)
  • Retrieve 5VEB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VEB from S2C, [Save to disk]
  • Re-refined 5veb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VEB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5veb_A] [5veb_B] [5veb_H] [5veb_L] [5veb_X] [5veb_Y]
  • SWISS-PROT database:

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