5VFC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	9BA, EDO, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of a Highly Potent, Cell-Permeable Macrocyclic Peptidomimetic (MM-589) Targeting the WD Repeat Domain 5 Protein (WDR5)-Mixed Lineage Leukemia (MLL) Protein-Protein Interaction., Karatas H, Li Y, Liu L, Ji J, Lee S, Chen Y, Yang J, Huang L, Bernard D, Xu J, Townsend EC, Cao F, Ran X, Li X, Wen B, Sun D, Stuckey JA, Lei M, Dou Y, Wang S, J Med Chem. 2017 Jun 22;60(12):4818-4839. doi: 10.1021/acs.jmedchem.6b01796. Epub, 2017 Jun 12. PMID:28603984

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk] Biological Unit Coordinates (5vfc.pdb1.gz) 99 Kb LPC: Ligand-Protein Contacts for 5VFC CSU: Contacts of Structural Units for 5VFC Structure Factors (1218 Kb) Retrieve 5VFC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VFC from S2C, [Save to disk] Re-refined 5vfc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VFC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vfc_A] SWISS-PROT database:

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