5VFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	9CM, 9CP, KCX, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	ETX2514 is a broad-spectrum beta-lactamase inhibitor for the treatment of drug-resistant Gram-negative bacteria including Acinetobacter baumannii., Durand-Reville TF, Guler S, Comita-Prevoir J, Chen B, Bifulco N, Huynh H, Lahiri S, Shapiro AB, McLeod SM, Carter NM, Moussa SH, Velez-Vega C, Olivier NB, McLaughlin R, Gao N, Thresher J, Palmer T, Andrews B, Giacobbe RA, Newman JV, Ehmann DE, de Jonge B, O'Donnell J, Mueller JP, Tommasi RA, Miller AA, Nat Microbiol. 2017 Jun 30;2:17104. doi: 10.1038/nmicrobiol.2017.104. PMID:28665414

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (5vfd.pdb1.gz) 86 Kb LPC: Ligand-Protein Contacts for 5VFD CSU: Contacts of Structural Units for 5VFD Structure Factors (1155 Kb) Retrieve 5VFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VFD from S2C, [Save to disk] Re-refined 5vfd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vfd_A] SWISS-PROT database:

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