5VFO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
G, g
  • positive regulation of NF-ka...

    • J, j


    K, k


    L, l


    P, p


    Q, q


    R, r


    S, s


    T, t


    h, H


    i, I


    m, M


    n, N, o, O


    Primary referenceStructural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome., Zhu Y, Wang WL, Yu D, Ouyang Q, Lu Y, Mao Y, Nat Commun. 2018 Apr 10;9(1):1360. doi: 10.1038/s41467-018-03785-w. PMID:29636472
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1092 Kb) [Save to disk]
  • Biological Unit Coordinates (5vfo.pdb1.gz) 1085 Kb
  • CSU: Contacts of Structural Units for 5VFO
  • Retrieve 5VFO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VFO from S2C, [Save to disk]
    • View 5VFO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vfo_N] [5vfo_M] [5vfo_O] [5vfo_P] [5vfo_Q] [5vfo_R] [5vfo_S] [5vfo_T] [5vfo_g] [5vfo_h] [5vfo_i] [5vfo_j] [5vfo_k] [5vfo_l] [5vfo_m] [5vfo_n] [5vfo_o] [5vfo_p] [5vfo_q] [5vfo_r] [5vfo_s] [5vfo_t] [5vfo_G] [5vfo_H] [5vfo_I] [5vfo_J] [5vfo_K] [5vfo_L]
  • SWISS-PROT database:

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