5VG0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CU, PER enzyme
Gene JDEN
Primary referenceNeutron and Atomic Resolution X-ray Structures of a Lytic Polysaccharide Monooxygenase Reveal Copper-Mediated Dioxygen Binding and Evidence for N-Terminal Deprotonation., Bacik JP, Mekasha S, Forsberg Z, Kovalevsky AY, Vaaje-Kolstad G, Eijsink VGH, Nix JC, Coates L, Cuneo MJ, Unkefer CJ, Chen JC, Biochemistry. 2017 May 23;56(20):2529-2532. doi: 10.1021/acs.biochem.7b00019., Epub 2017 May 11. PMID:28481095
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (5vg0.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (5vg0.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 5VG0
  • CSU: Contacts of Structural Units for 5VG0
  • Structure Factors (1307 Kb)
  • Retrieve 5VG0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VG0 from S2C, [Save to disk]
  • Re-refined 5vg0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VG0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vg0] [5vg0_A] [5vg0_B]
  • SWISS-PROT database:

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