5VI6		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5OM, CPI, DIO, EDO, K, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Binding of the Microbial Cyclic Tetrapeptide Trapoxin A to the Class I Histone Deacetylase HDAC8., Porter NJ, Christianson DW, ACS Chem Biol. 2017 Aug 30. doi: 10.1021/acschembio.7b00330. PMID:28846375

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk] Biological Unit Coordinates (5vi6.pdb1.gz) 184 Kb LPC: Ligand-Protein Contacts for 5VI6 CSU: Contacts of Structural Units for 5VI6 Structure Factors (3817 Kb) Retrieve 5VI6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VI6 from S2C, [Save to disk]

View 5VI6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vi6_A] [5vi6_B] SWISS-PROT database:

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