5VP1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	9GA, MG, ZN	enzyme
Gene Ontology	Chain Function Process Component C, B, A
Primary reference	Discovery of a Novel Series of Pyrazolo[1,5-a]pyrimidine-Based Phosphodiesterase 2A Inhibitors Structurally Different from N-((1S)-1-(3-Fluoro-4-(trifluoromethoxy)phenyl)-2-methoxyethyl)-7-methoxy-2-oxo-2 ,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide (TAK-915), for the Treatment of Cognitive Disorders., Mikami S, Kawasaki M, Ikeda S, Negoro N, Nakamura S, Nomura I, Ashizawa T, Kokubo H, Hoffman ID, Zou H, Oki H, Uchiyama N, Hiura Y, Miyamoto M, Itou Y, Nakashima M, Iwashita H, Taniguchi T, Chem Pharm Bull (Tokyo). 2017;65(11):1058-1077. doi: 10.1248/cpb.c17-00564. PMID:29093293

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (349 Kb) [Save to disk] Biological Unit Coordinates (5vp1.pdb1.gz) 226 Kb Biological Unit Coordinates (5vp1.pdb2.gz) 233 Kb LPC: Ligand-Protein Contacts for 5VP1 CSU: Contacts of Structural Units for 5VP1 Structure Factors (2456 Kb) Retrieve 5VP1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VP1 from S2C, [Save to disk]

View 5VP1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vp1_A] [5vp1_B] [5vp1_C] SWISS-PROT database:

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