5VPK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component C, A, B
Primary reference	Crystal structures of mite allergens Der f 1 and Der p 1 reveal differences in surface-exposed residues that may influence antibody binding., Chruszcz M, Chapman MD, Vailes LD, Stura EA, Saint-Remy JM, Minor W, Pomes A, J Mol Biol. 2009 Feb 20;386(2):520-30. Epub 2008 Dec 30. PMID:19136006

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk] Biological Unit Coordinates (5vpk.pdb1.gz) 76 Kb Biological Unit Coordinates (5vpk.pdb2.gz) 76 Kb Biological Unit Coordinates (5vpk.pdb3.gz) 73 Kb CSU: Contacts of Structural Units for 5VPK Structure Factors (1274 Kb) Retrieve 5VPK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VPK from S2C, [Save to disk] Re-refined 5vpk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VPK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vpk] [5vpk_A] [5vpk_B] [5vpk_C] SWISS-PROT database:

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