5VRX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8OG, ACT, CA, IMD, PEG, TTP	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta., Reed AJ, Suo Z, J Am Chem Soc. 2017 Jul 19;139(28):9684-9690. doi: 10.1021/jacs.7b05048. Epub, 2017 Jul 6. PMID:28682600

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk] Biological Unit Coordinates (5vrx.pdb1.gz) 70 Kb LPC: Ligand-Protein Contacts for 5VRX CSU: Contacts of Structural Units for 5VRX Structure Factors (171 Kb) Retrieve 5VRX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VRX from S2C, [Save to disk] Re-refined 5vrx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VRX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vrx_A] [5vrx_D] [5vrx_P] [5vrx_T] SWISS-PROT database:

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