5VT7 Hydrolase date May 15, 2017
title Aba-Mimicking Ligand Amc1beta In Complex With Aba Receptor P Pp2c Hab1
authors M.J.Cao, Y.L.Zhang, X.Liu, H.Huang, X.E.Zhou, W.L.Wang, A.Zeng, Z.Zhao, T.Si, J.M.Du, W.W.Wu, F.X.Wang, H.X.Xu, J.K.Zhu
compound source
Molecule: Abscisic Acid Receptor Pyl2
Chain: A
Synonym: Pyr1-Like Protein 2,Regulatory Components Of Aba R 14;
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Pyl2, Rcar14, At2g26040, T19l18.15
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Protein Phosphatase 2c 16
Chain: B
Synonym: Atpp2c16,Atp2c-Ha,Protein Hypersensitive To Aba 1, Phosphatase 2c Hab1,Pp2c Hab1;
Ec: 3.1.3.16
Engineered: Yes

Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Hab1, P2c-Ha, At1g72770, F28p22.4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.182 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.112 66.478 145.410 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.62 Å
ligand A1C, MG enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein phosphatase inhibito...


  • B


    Primary referenceCombining chemical and genetic approaches to increase drought resistance in plants., Cao MJ, Zhang YL, Liu X, Huang H, Zhou XE, Wang WL, Zeng A, Zhao CZ, Si T, Du J, Wu WW, Wang FX, Xu HE, Zhu JK, Nat Commun. 2017 Oct 30;8(1):1183. doi: 10.1038/s41467-017-01239-3. PMID:29084945
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (5vt7.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (5vt7.pdb2.gz) 50 Kb
  • Biological Unit Coordinates (5vt7.pdb3.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 5VT7
  • CSU: Contacts of Structural Units for 5VT7
  • Structure Factors (276 Kb)
  • Retrieve 5VT7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VT7 from S2C, [Save to disk]
  • View 5VT7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5VT7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vt7_B] [5vt7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5VT7
  • Community annotation for 5VT7 at PDBWiki (http://pdbwiki.org)

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