5VVL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NI enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, A, C
  • nuclease activity
  • endonuclease activity


    • E, F
  • nuclease activity
  • endonuclease activity


    • Primary referenceStructures of the CRISPR genome integration complex., Wright AV, Liu JJ, Knott GJ, Doxzen KW, Nogales E, Doudna JA, Science. 2017 Jul 20. pii: eaao0679. doi: 10.1126/science.aao0679. PMID:28729350
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (484 Kb) [Save to disk]
  • Biological Unit Coordinates (5vvl.pdb1.gz) 477 Kb
  • LPC: Ligand-Protein Contacts for 5VVL
  • CSU: Contacts of Structural Units for 5VVL
  • Structure Factors (2046 Kb)
  • Retrieve 5VVL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VVL from S2C, [Save to disk]
  • Re-refined 5vvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VVL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vvl_A] [5vvl_B] [5vvl_C] [5vvl_D] [5vvl_E] [5vvl_F] [5vvl_G] [5vvl_H] [5vvl_J] [5vvl_K]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science