5VVO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural insights into the substrate binding adaptability and specificity of human O-GlcNAcase., Li B, Li H, Hu CW, Jiang J, Nat Commun. 2017 Sep 22;8(1):666. doi: 10.1038/s41467-017-00865-1. PMID:28939839
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (5vvo.pdb1.gz) 143 Kb
  • CSU: Contacts of Structural Units for 5VVO
  • Structure Factors (1115 Kb)
  • Retrieve 5VVO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VVO from S2C, [Save to disk]
  • View 5VVO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vvo_A] [5vvo_B]
  • SWISS-PROT database:

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