5VXX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B6D, GLA, OPE enzyme
Gene
Ontology
ChainFunctionProcessComponent
I, Q, P, C, R, O, H, J, D, F, L, G, S, B, T, E, M, A, N, K, U


Primary referenceCryoelectron Microscopy Reconstructions of the Pseudomonas aeruginosa and Neisseria gonorrhoeae Type IV Pili at Sub-nanometer Resolution., Wang F, Coureuil M, Osinski T, Orlova A, Altindal T, Gesbert G, Nassif X, Egelman EH, Craig L, Structure. 2017 Sep 5;25(9):1423-1435.e4. doi: 10.1016/j.str.2017.07.016. PMID:28877506
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (445 Kb) [Save to disk]
  • Biological Unit Coordinates (5vxx.pdb1.gz) 435 Kb
  • LPC: Ligand-Protein Contacts for 5VXX
  • CSU: Contacts of Structural Units for 5VXX
  • Retrieve 5VXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VXX from S2C, [Save to disk]
  • View 5VXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vxx_A] [5vxx_B] [5vxx_C] [5vxx_D] [5vxx_E] [5vxx_F] [5vxx_G] [5vxx_H] [5vxx_I] [5vxx_J] [5vxx_K] [5vxx_L] [5vxx_M] [5vxx_N] [5vxx_O] [5vxx_P] [5vxx_Q] [5vxx_R] [5vxx_S] [5vxx_T] [5vxx_U]
  • SWISS-PROT database:

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