5VY4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
G, S, M, U, I, W, C, 0, Y, O, Q, K, E, A


L, F, Z, T, N, B, R, J, H, D, 1, V, P, X


Primary referenceAchieving better-than-3-A resolution by single-particle cryo-EM at 200 keV., Herzik MA Jr, Wu M, Lander GC, Nat Methods. 2017 Oct 9. doi: 10.1038/nmeth.4461. PMID:28991891
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8045 Kb) [Save to disk]
  • Biological Unit Coordinates (5vy4.pdb1.gz) 812 Kb
  • CSU: Contacts of Structural Units for 5VY4
  • Retrieve 5VY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VY4 from S2C, [Save to disk]
  • View 5VY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vy4_L] [5vy4_K] [5vy4_M] [5vy4_N] [5vy4_O] [5vy4_P] [5vy4_Q] [5vy4_R] [5vy4_S] [5vy4_T] [5vy4_U] [5vy4_V] [5vy4_W] [5vy4_X] [5vy4_Y] [5vy4_Z] [5vy4_0] [5vy4_1] [5vy4_A] [5vy4_B] [5vy4_C] [5vy4_D] [5vy4_E] [5vy4_F] [5vy4_G] [5vy4_H] [5vy4_I] [5vy4_J]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science