5W2H Transferase date Jun 06, 2017
title Crystal Structure Of The Core Catalytic Domain Of Human Inos Phosphate Multikinase In Complex With Ins(1,4,5)P3 And Adp
authors H.Wang, S.B.Shears
compound source
Molecule: Inositol Polyphosphate Multikinase,Inositol Polyp Multikinase;
Chain: A
Synonym: Inositol 1,3,4,6-Tetrakisphosphate 5-Kinase,Inosit 6-Tetrakisphosphate 5-Kinase;
Ec: 2.7.1.151
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ipmk, Impk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.163 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.015 78.015 85.915 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ADP, I3P, MG, PO4 enzyme Transferase E.C.2.7.1.151 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural features of human inositol phosphate multikinase rationalize its inositol phosphate kinase and phosphoinositide 3-kinase activities., Wang H, Shears SB, J Biol Chem. 2017 Sep 7. pii: jbc.M117.801845. doi: 10.1074/jbc.M117.801845. PMID:28882892
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (5w2h.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 5W2H
  • CSU: Contacts of Structural Units for 5W2H
  • Structure Factors (580 Kb)
  • Retrieve 5W2H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5W2H from S2C, [Save to disk]
  • View 5W2H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5W2H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5w2h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5W2H
  • Community annotation for 5W2H at PDBWiki (http://pdbwiki.org)

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