5WAL Transferase Transferase Inhibitor date Jun 26, 2017
title Identification Of An Imidazopyridine Scaffold To Generate Po Selective Tyk2 Inhibitors That Demonstrate Activity In An I Psoriasis Model
authors M.H.Ultsch, S.Magnuson
compound source
Molecule: Non-Receptor Tyrosine-Protein Kinase Tyk2
Chain: A
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tyk2
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 21 21 21
R_factor 0.182 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.097 74.301 106.444 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand 9ZS enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification of an imidazopyridine scaffold to generate potent and selective TYK2 inhibitors that demonstrate activity in an in vivo psoriasis model., Liang J, Van Abbema A, Balazs M, Barrett K, Berezhkovsky L, Blair WS, Chang C, Delarosa D, DeVoss J, Driscoll J, Eigenbrot C, Goodacre S, Ghilardi N, MacLeod C, Johnson A, Bir Kohli P, Lai Y, Lin Z, Mantik P, Menghrajani K, Nguyen H, Peng I, Sambrone A, Shia S, Smith J, Sohn S, Tsui V, Ultsch M, Williams K, Wu LC, Yang W, Zhang B, Magnuson S, Bioorg Med Chem Lett. 2017 Aug 12. pii: S0960-894X(17)30823-5. doi:, 10.1016/j.bmcl.2017.08.022. PMID:28830649
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (5wal.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 5WAL
  • CSU: Contacts of Structural Units for 5WAL
  • Structure Factors (370 Kb)
  • Retrieve 5WAL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WAL from S2C, [Save to disk]
  • View 5WAL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WAL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wal_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WAL
  • Community annotation for 5WAL at PDBWiki (http://pdbwiki.org)

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