5WDA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, MEA enzyme
Gene
Ontology
ChainFunctionProcessComponent
M, O, C, W, N, J, L, H, F, D, X, P, K, A, B, Y, R, V, U, S, E, I, Q, G, T


Primary referenceStructure of the calcium-dependent type 2 secretion pseudopilus., Lopez-Castilla A, Thomassin JL, Bardiaux B, Zheng W, Nivaskumar M, Yu X, Nilges M, Egelman EH, Izadi-Pruneyre N, Francetic O, Nat Microbiol. 2017 Oct 9. doi: 10.1038/s41564-017-0041-2. PMID:28993624
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (854 Kb) [Save to disk]
  • Biological Unit Coordinates (5wda.pdb1.gz) 844 Kb
  • LPC: Ligand-Protein Contacts for 5WDA
  • CSU: Contacts of Structural Units for 5WDA
  • Retrieve 5WDA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WDA from S2C, [Save to disk]
  • View 5WDA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wda_A] [5wda_B] [5wda_C] [5wda_D] [5wda_E] [5wda_F] [5wda_G] [5wda_H] [5wda_I] [5wda_J] [5wda_K] [5wda_L] [5wda_M] [5wda_N] [5wda_O] [5wda_P] [5wda_Q] [5wda_R] [5wda_S] [5wda_T] [5wda_U] [5wda_V] [5wda_W] [5wda_X] [5wda_Y]
  • SWISS-PROT database:

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