5WRS Transferase date Dec 03, 2016
title Crystal Structure Of Fam20a In Complex With Atp
authors Q.Zhu
compound source
Molecule: Pseudokinase Fam20a
Chain: A, B
Fragment: Unp Residues 89-526
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fam20a, Unq9388pro34279
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 32 2 1
R_factor 0.203 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.202 157.202 144.802 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.75 Å
ligand ATP, NAG enzyme
Primary referenceStructure of Fam20A reveals a pseudokinase featuring a unique disulfide pattern and inverted ATP-binding., Cui J, Zhu Q, Zhang H, Cianfrocco MA, Leschziner AE, Dixon JE, Xiao J, Elife. 2017 Apr 22;6. pii: e23990. doi: 10.7554/eLife.23990. PMID:28432788
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (308 Kb) [Save to disk]
  • Biological Unit Coordinates (5wrs.pdb1.gz) 302 Kb
  • LPC: Ligand-Protein Contacts for 5WRS
  • CSU: Contacts of Structural Units for 5WRS
  • Structure Factors (393 Kb)
  • Retrieve 5WRS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WRS from S2C, [Save to disk]
  • Re-refined 5wrs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5WRS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WRS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5wrs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wrs_A] [5wrs_B] [5wrs]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WRS
  • Community annotation for 5WRS at PDBWiki (http://pdbwiki.org)

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