5WSH Immune System date Dec 07, 2016
title Structure Of Hla-A2 P130
authors Y.Zhang, Y.Wu, J.Qi, J.Liu, G.F.Gao, S.Meng
compound source
Molecule: Hla Class I Histocompatibility Antigen, A-2 Alpha
Chain: A
Fragment: Unp Residues 25-299
Synonym: Mhc Class I Antigen A2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hla-A, Hlaa
Expression_system: Escherichia Coli
Expression_system_taxid: 83333
Expression_system_strain: K-12

Molecule: Beta-2-Microglobulin
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Escherichia Coli
Expression_system_taxid: 83333
Expression_system_strain: K-12

Molecule: Gly-Val-Trp-Ile-Arg-Thr-Pro-Thr-Ala
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.162 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.159 78.675 60.295 90.00 96.93 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (5wsh.pdb1.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 5WSH
  • CSU: Contacts of Structural Units for 5WSH
  • Structure Factors (498 Kb)
  • Retrieve 5WSH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WSH from S2C, [Save to disk]
  • View 5WSH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WSH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wsh_C] [5wsh_B] [5wsh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WSH
  • Community annotation for 5WSH at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science