5WVW	Dna Binding Protein Dna	date	Dec 29, 2016
title	The Crystal Structure Of Cren7 Mutant L28a In Complex With D
authors	Z.F.Zhang, M.H.Zhao, L.Wang, Y.Y.Chen, Y.H.Dong, Y.Gong, L.Huang
compound		source
Molecule: Chromatin Protein Cren7 Chain: A, B Engineered: Yes Mutation: Yes		Organism_scientific: Sulfolobus Solfataricus (Strain Atcc 3 Dsm 1617 Jcm 11322 P2); Organism_taxid: 273057 Strain: Atcc 35092 Dsm 1617 Jcm 11322 P2 Gene: Cren7, Sso6901 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet30a
Molecule: Dna (5'-D(Gptpgpaptpcpapc)-3') Chain: C, D, E, F Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: C 2 2 21	R_factor 0.184 R_Free 0.203
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.511 77.605 104.173 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA., Zhang Z, Zhao M, Wang L, Chen Y, Dong Y, Gong Y, Huang L, Biochem J. 2017 Apr 4. pii: BCJ20170036. doi: 10.1042/BCJ20170036. PMID:28377493

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (5wvw.pdb1.gz) 19 Kb Biological Unit Coordinates (5wvw.pdb2.gz) 19 Kb CSU: Contacts of Structural Units for 5WVW Structure Factors (617 Kb) Retrieve 5WVW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5WVW from S2C, [Save to disk] Re-refined 5wvw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5WVW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5WVW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5wvw] [5wvw_A] [5wvw_E] [5wvw_B] [5wvw_F] [5wvw_C] [5wvw_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5WVW

Community annotation for 5WVW at PDBWiki (http://pdbwiki.org)

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