5X19		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CDL, CHD, CMO, CU, CUA, DMU, EDO, FME, HEA, MG, NA, PEK, PGV, PSC, SAC, TGL, TPO, UNX, ZN	enzyme
Gene Ontology	Chain Function Process Component A, N D, Q G, T H, U I, V cytochrome-c oxidase activit... J, W L, Y M, Z O, B cytochrome-c oxidase activit... P, C cytochrome-c oxidase activit... oxidoreduction-driven active... R, E S, F X, K
Primary reference	A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase., Shimada A, Kubo M, Baba S, Yamashita K, Hirata K, Ueno G, Nomura T, Kimura T, Shinzawa-Itoh K, Baba J, Hatano K, Eto Y, Miyamoto A, Murakami H, Kumasaka T, Owada S, Tono K, Yabashi M, Yamaguchi Y, Yanagisawa S, Sakaguchi M, Ogura T, Komiya R, Yan J, Yamashita E, Yamamoto M, Ago H, Yoshikawa S, Tsukihara T, Sci Adv. 2017 Jul 14;3(7):e1603042. doi: 10.1126/sciadv.1603042. eCollection 2017, Jul. PMID:28740863

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1261 Kb) [Save to disk] Biological Unit Coordinates (5x19.pdb1.gz) 623 Kb Biological Unit Coordinates (5x19.pdb2.gz) 625 Kb LPC: Ligand-Protein Contacts for 5X19 CSU: Contacts of Structural Units for 5X19 Structure Factors (7384 Kb) Retrieve 5X19 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5X19 from S2C, [Save to disk]

View 5X19 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5x19_A] [5x19_B] [5x19_C] [5x19_D] [5x19_E] [5x19_F] [5x19_G] [5x19_H] [5x19_I] [5x19_J] [5x19_K] [5x19_L] [5x19_M] [5x19_N] [5x19_O] [5x19_P] [5x19_Q] [5x19_R] [5x19_S] [5x19_T] [5x19_U] [5x19_V] [5x19_W] [5x19_X] [5x19_Y] [5x19_Z] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---