5XJS	Splicing	date	May 04, 2017
title	Crystal Structure Of The Gemin2-Binding Domain Of Smn, Gemin Complex With Smd1(1-82)D2fe From Human
authors	H.Yi, R.Zhang
compound		source
Molecule: Gem-Associated Protein 2 Chain: 2 Fragment: Unp Residues 40-280 Synonym: Gemin-2,Component Of Gems 2,Survival Of Motor Neur Protein-Interacting Protein 1,Smn-Interacting Protein 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gemin2, Sip1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Small Nuclear Ribonucleoprotein Sm D1 Chain: A Fragment: Unp Residues 1-82 Synonym: Sm-D1,Sm-D Autoantigen,Snrnp Core Protein D1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpd1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Small Nuclear Ribonucleoprotein Sm D2 Chain: B Synonym: Sm-D2,Snrnp Core Protein D2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpd2, Snrpd1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Small Nuclear Ribonucleoprotein E Chain: E Synonym: Snrnp-E,Sm Protein E,Sme Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpe Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Small Nuclear Ribonucleoprotein F Chain: F Synonym: Snrnp-F,Sm Protein F,Smf Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpf, Pbscf Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Survival Motor Neuron Protein Chain: M Fragment: Unp Residues 26-62 Synonym: Component Of Gems 1,Gemin-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Smn1, Smn, Smnt, Smn2, Smnc Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.186 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.170 114.090 125.390 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.38 Å
Gene Ontology	Chain Function Process Component 2 A B catalytic step 2 spliceosome... E catalytic step 2 spliceosome... F catalytic step 2 spliceosome... M

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (5xjs.pdb1.gz) 90 Kb CSU: Contacts of Structural Units for 5XJS Structure Factors (476 Kb) Retrieve 5XJS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5XJS from S2C, [Save to disk]

View 5XJS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5XJS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5xjs_B] [5xjs_M] [5xjs_2] [5xjs_F] [5xjs_E] [5xjs_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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