5XJY Transport Protein date May 04, 2017
title Cryo-Em Structure Of Human Abca1
authors H.W.Qian, N.Yan, X.Gong
compound source
Molecule: Atp-Binding Cassette Sub-Family A Member 1
Chain: A
Synonym: Atp-Binding Cassette Transporter 1,Atp-Binding Cas Cholesterol Efflux Regulatory Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Abca1, Abc1, Cerp
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.10 Å
subcellular loc. Membrane localization by OPM: Eukaryotic plasma membrane
extracellular side
cytoplasmic side
Gene
Ontology
ChainFunctionProcessComponent
A
  • apolipoprotein A-I receptor ...
  • intermembrane cholesterol tr...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (248 Kb) [Save to disk]
  • Biological Unit Coordinates (5xjy.pdb1.gz) 235 Kb
  • CSU: Contacts of Structural Units for 5XJY
  • Retrieve 5XJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XJY from S2C, [Save to disk]
  • View 5XJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XJY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5xjy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xjy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XJY
  • Community annotation for 5XJY at PDBWiki (http://pdbwiki.org)

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